miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Strongylocentrotus purpuratus



ABOUT THIS RECORD

ID: MNEST008636
species: Strongylocentrotus purpuratus
miRNA family: mir-982
source: miRNEST

Taxonomy by NCBI:
Strongylocentrotus purpuratus Strongylocentrotus Strongylocentrotidae Echinoida Echinacea Euechinoidea Echinoidea Echinozoa Eleutherozoa Echinodermata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTTTGTTATTTGTCGTTGAG

miRNA*
CGGTGACAAGTGACAGCCTTT

mismatches: 4
bulges: 0

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pre-miRNA
CCCCGTTTCCAAAACTTGTCATCGGTGACAAGTGACAGCCTTTGTTGTGAGCTACTGAGGTCCTTACTTTTGGTTGGTTATCAGCGGGTTTGTCACTGAT
TTTTGTTATTTGTCGTTGAG
GGGGGGCTTTGTGAAACAC


dot-bracket secondary structure
....(((((((((.(((.((.(((((((((((((((((...(((.((((((((.((((...((..(((...))).))...))))..)))))).)).))).
..))))))))))))))))).
)).))).)))).)))))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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